Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs7615300 | chr3:99968110 | C/T | 1.57E-5 | 214 | 16.47 | 17.8 | 4.67 | KM Plot |
| KIRP | rs76173282 | chr3:50299910 | T/TA | 0.000118 | 212 | 14.97 | 20 | 7.13 | KM Plot |
| KIRP | rs76200252 | chr1:48811326 | G/A | 3.49E-7 | 213 | 14.85 | 19.87 | 11.03 | KM Plot |
| KIRP | rs7625101 | chr3:99929024 | G/A | 5.27E-8 | 207 | 16.47 | 18.88 | 3.57 | KM Plot |
| KIRP | rs76280141 | chr11:34823501 | C/G | 0 | 212 | 15.33 | 17 | 3.83 | KM Plot |
| KIRP | rs76403628 | chr17:80764955 | T/A | 0.000115 | 207 | 14.85 | 17.6 | 13.17 | KM Plot |
| KIRP | rs76436102 | chr11:34918543 | A/G | 5.07E-12 | 211 | 17.2 | 13.6 | 5.57 | KM Plot |
| KIRP | rs76469370 | chr17:80851827 | C/T | 0.00011 | 209 | 14.87 | 19.27 | 13.17 | KM Plot |
| KIRP | rs7647193 | chr3:99934240 | C/T | 3.54E-8 | 211 | 16.47 | 19.3 | 4.07 | KM Plot |
| KIRP | rs76500984 | chr3:100013217 | G/C | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs76563012 | chr17:77864571 | G/T | 0.000439 | 209 | 14.87 | 22.27 | 6.05 | KM Plot |
| KIRP | rs76573133 | chr11:34861732 | T/C | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs76579763 | chr14:59935971 | C/G | 3.85E-5 | 212 | 16.47 | 15.07 | 6.63 | KM Plot |
| KIRP | rs76621292 | chr22:46883340 | G/A | 3.27E-7 | 205 | 16.45 | 12.72 | 13.17 | KM Plot |
| KIRP | rs76633768 | chr11:34859295 | C/G | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |